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  5. lcl|LHPG02000010.1_cds_PRW51149.1_969

lcl|LHPG02000010.1_cds_PRW51149.1_969 (PRW51149)


Aliases : PRW51149

Description : Antiviral helicase


Gene families : OG_01_0000182 (OrthoFinder) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000010.1_cds_PRW51149.1_969
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre11.g482483 30775678 RNA processing.RNA decay.exosome complex.associated... 0.03 OrthoFinder
Dusal.0380s00007.1 33193499 DEAD/DEAH box helicase domain [Interproscan]. 0.02 OrthoFinder
EOD14490 No alias DEAD/DEAH box helicase domain [Interproscan]. 0.02 OrthoFinder
EOD29418 No alias ATP-dependent RNA helicase Ski2, C-terminal; DEAD/DEAH... 0.03 OrthoFinder
PTI_02G06900.1 No alias rRNA-processing arch domain; ATP-dependent RNA helicase... 0.02 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491098.1_9855 KAA8491098 Superkiller viralicidic activity 2-like 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 433 578
IPR012961 Ski2_C 1387 1557
IPR025696 rRNA_proc-arch_dom 922 1031
IPR025696 rRNA_proc-arch_dom 1236 1360
IPR040801 Ski2_N 109 212
No external refs found!