lcl|LHPG02000010.1_cds_PRW51057.1_1185 (PRW51057)


Aliases : PRW51057

Description : Thylakoid lumenal kDa chloroplastic


Gene families : OG_01_0002496 (OrthoFinder) Phylogenetic Tree(s): OG0002496_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000010.1_cds_PRW51057.1_1185
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz02g00290.t1 No alias Pentapeptide repeat [Interproscan]. 0.04 OrthoFinder
XM_002500402.1 MICPUN_90229, 90229 Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder
XM_003059120.1 MicpuC2_27217, 27217 Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01003411.1_cds_GFH27263.1_21740 HaLaN_25559, GFH27263 Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 161 193
IPR001646 5peptide_repeat 123 154
No external refs found!