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  5. lcl|LHPG02000010.1_cds_PRW50813.1_852

lcl|LHPG02000010.1_cds_PRW50813.1_852 (PRW50813)


Aliases : PRW50813

Description : 50S ribosomal chloroplastic


Gene families : OG_01_0006348 (OrthoFinder) Phylogenetic Tree(s): OG0006348_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000010.1_cds_PRW50813.1_852
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cre08.g365400 30773996, PRPL31 Protein biosynthesis.organelle translation... 0.09 OrthoFinder
Cz04g14290.t1 No alias Ribosomal protein L31 [Interproscan]. 0.09 OrthoFinder
OT_14G02100.1 No alias Ribosomal protein L31 [Interproscan]. 0.03 OrthoFinder
TPCG02730.1 No alias Ribosomal protein L31 [Interproscan]. 0.03 OrthoFinder
Vocar.0020s0052.1 32886766 Ribosomal protein L31 [Interproscan]. 0.1 OrthoFinder
XM_002505484.1 MICPUN_87463, 87463 Ribosomal protein L31 [Interproscan]. 0.06 OrthoFinder
XM_003063593.1 MicpuC2_53493, 53493 Ribosomal protein L31 [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR002150 Ribosomal_L31 31 95
No external refs found!