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  5. lcl|LHPG02000010.1_cds_PRW50796.1_937

lcl|LHPG02000010.1_cds_PRW50796.1_937 (PRW50796)


Aliases : PRW50796

Description : Polyubiquitin 3 isoform A


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000010.1_cds_PRW50796.1_937
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.76 tig00000144_g9067.t1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder
SymbC1.scaffold2271.3 2271.3 Ubiquitin-like domain; Superoxide dismutase, Nickel-type... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0033566 gamma-tubulin complex localization IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 644 715
IPR000626 Ubiquitin-like_dom 568 639
IPR000626 Ubiquitin-like_dom 416 487
IPR000626 Ubiquitin-like_dom 720 791
IPR000626 Ubiquitin-like_dom 492 563
IPR018108 Mitochondrial_sb/sol_carrier 221 307
IPR018108 Mitochondrial_sb/sol_carrier 17 102
IPR018108 Mitochondrial_sb/sol_carrier 113 208
No external refs found!