- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PRW56285
Description : T-complex 1 subunit delta
Gene families : OG_01_0002443 (OrthoFinder) Phylogenetic Tree(s): OG0002443_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000009.1_cds_PRW56285.1_10299 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000842.25 | tig00000842_g4844.t1 | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.02 | OrthoFinder | |
| Cre05.g234639 | 30783461, CCT4 | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.04 | OrthoFinder | |
| Cz08g02120.t1 | No alias | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.06 | OrthoFinder | |
| EOD26391 | No alias | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.03 | OrthoFinder | |
| OT_06G01020.1 | No alias | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.05 | OrthoFinder | |
| PTI_23G00040.1 | No alias | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1769_g296510.1 | Contig4211.g32041 | Thermosome subunit beta (Fragment) | 0.03 | OrthoFinder | |
| Transcript_contig_55830 | 55830 | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0008s0413.1 | 32897283 | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.03 | OrthoFinder | |
| XM_002501784.1 | MICPUN_81357, 81357 | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.03 | OrthoFinder | |
| XM_003059139.1 | MicpuC2_47517, 47517 | Chaperonin Cpn60/TCP-1 family [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|BLLF01000179.1_cds_GFH08706.1_3183 | HaLaN_03717, GFH08706 | T-complex protein 1 subunit delta | 0.03 | OrthoFinder | |
| lcl|BLLF01001742.1_cds_GFH21006.1_15483 | HaLaN_18221, GFH21006 | T-complex protein 1 subunit delta | 0.03 | OrthoFinder | |
| lcl|VRMN01000003.1_cds_KAA8495294.1_1292 | KAA8495294 | T-complex protein 1 subunit delta | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Enrichment |
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004057 | arginyltransferase activity | IEP | Enrichment |
| MF | GO:0004497 | monooxygenase activity | IEP | Enrichment |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| BP | GO:0016598 | protein arginylation | IEP | Enrichment |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| MF | GO:0016972 | thiol oxidase activity | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| MF | GO:0051087 | chaperone binding | IEP | Enrichment |
| MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002423 | Cpn60/TCP-1 | 39 | 534 |
| No external refs found! |