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  5. lcl|LHPG02000009.1_cds_PRW56174.1_10139

lcl|LHPG02000009.1_cds_PRW56174.1_10139 (PRW56174)


Aliases : PRW56174

Description : DNA-3-methyladenine glycosylase


Gene families : OG_01_0000408 (OrthoFinder) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW56174.1_10139
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_55510 55510 Zinc finger, MYND-type [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60852.1_4380 PRW60852 Ocs element-binding factor 1-like 0.05 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57753.1_8539 PRW57753 Zinc finger MYND domain-containing 19 Q7TSV3 isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!