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  5. lcl|LHPG02000009.1_cds_PRW56156.1_10301

lcl|LHPG02000009.1_cds_PRW56156.1_10301 (PRW56156)


Aliases : PRW56156

Description : RTF2-like protein


Gene families : OG_01_0001452 (OrthoFinder) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW56156.1_10301
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_57754 57754 Replication termination factor 2, RING-finger [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046677 response to antibiotic IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR027799 Rtf2_RING-finger 76 351
IPR001841 Znf_RING 483 534
No external refs found!