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  5. lcl|LHPG02000009.1_cds_PRW56088.1_10267

lcl|LHPG02000009.1_cds_PRW56088.1_10267 (PRW56088)


Aliases : PRW56088

Description : Ycf49 isoform X1


Gene families : OG_01_0000817 (OrthoFinder) Phylogenetic Tree(s): OG0000817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW56088.1_10267
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre08.g376450 30774052, CPLD36 No description available 0.03 OrthoFinder
OT_06G03740.1 No alias Protein of unknown function DUF3593; Uncharacterised... 0.03 OrthoFinder
PTI_05G00840.1 No alias Protein of unknown function DUF3593; Uncharacterised... 0.02 OrthoFinder
XM_002507878.1 MICPUN_74616, 74616 Uncharacterised protein family Ycf49 [Interproscan]. 0.05 OrthoFinder
XM_002508084.1 MICPUN_60549, 60549 Protein of unknown function DUF3593; Uncharacterised... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR019634 Uncharacterised_Ycf49 119 206
No external refs found!