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  5. lcl|LHPG02000009.1_cds_PRW56055.1_10000

lcl|LHPG02000009.1_cds_PRW56055.1_10000 (PRW56055)


Aliases : PRW56055

Description : 50S ribosomal L19-chloroplastic


Gene families : OG_01_0001014 (OrthoFinder) Phylogenetic Tree(s): OG0001014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW56055.1_10000
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cre07.g322500 30774415, MRPL19 No description available 0.03 OrthoFinder
Cre17.g734450 30782167, PRPL19 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.04 OrthoFinder
Cz09g01050.t1 No alias Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
Cz11g03120.t1 No alias Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
Dusal.0444s00003.1 33192973 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
OT_14G02200.1 No alias Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
Sro79_g042660.1 Contig1826.g16073 Protein L19 0.06 OrthoFinder
XM_002504578.1 MICPUN_84692, 84692 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
XM_003063550.1 MicpuC2_9123, 9123 Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
XM_003063582.1 MicpuC2_11548, 11548 Ribosomal protein L19 [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000249.1_cds_GFH09633.1_4110 HaLaN_04811, GFH09633 50S ribosomal protein L19, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Enrichment
CC GO:0005740 mitochondrial envelope IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
CC GO:0031967 organelle envelope IEP Enrichment
CC GO:0031975 envelope IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 94 187
No external refs found!