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Aliases : PRW56029
Description : UPF0187 chloroplastic
Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000009.1_cds_PRW56029.1_10086 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD31141 | No alias | Bestrophin/UPF0187 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD40639 | No alias | Bestrophin/UPF0187 [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_59797 | 59797 | Hypothetical protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006839 | mitochondrial transport | IEP | Enrichment |
| BP | GO:0006848 | pyruvate transport | IEP | Enrichment |
| BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Enrichment |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | Enrichment |
| BP | GO:0016073 | snRNA metabolic process | IEP | Enrichment |
| BP | GO:0016180 | snRNA processing | IEP | Enrichment |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Enrichment |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Enrichment |
| BP | GO:0043628 | ncRNA 3'-end processing | IEP | Enrichment |
| MF | GO:0046537 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | IEP | Enrichment |
| BP | GO:0098656 | anion transmembrane transport | IEP | Enrichment |
| BP | GO:1901475 | pyruvate transmembrane transport | IEP | Enrichment |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021134 | Bestrophin/UPF0187 | 63 | 307 |
| No external refs found! |