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  5. lcl|LHPG02000009.1_cds_PRW55959.1_9927

lcl|LHPG02000009.1_cds_PRW55959.1_9927 (PRW55959)


Aliases : PRW55959

Description : Qa-SYP3 Sed5p Syntaxin 5-type


Gene families : OG_01_0003160 (OrthoFinder) Phylogenetic Tree(s): OG0003160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW55959.1_9927
Cluster HCCA: Cluster_19


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0006378 mRNA polyadenylation IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR021538 Syntaxin-5_N 7 29
IPR000727 T_SNARE_dom 273 325
No external refs found!