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  5. lcl|LHPG02000009.1_cds_PRW55907.1_10013

lcl|LHPG02000009.1_cds_PRW55907.1_10013 (PRW55907)


Aliases : PRW55907

Description : 60S ribosomal L23


Gene families : OG_01_0000955 (OrthoFinder) Phylogenetic Tree(s): OG0000955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000009.1_cds_PRW55907.1_10013
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021290.9 tig00021290_g19971.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 OrthoFinder
Cre04.g211800 30791018, RPL23 Protein biosynthesis.cytosolic ribosome.large subunit... 0.42 OrthoFinder
Cz07g25090.t1 No alias Ribosomal protein L14P [Interproscan]. 0.22 OrthoFinder
Dusal.0430s00019.1 33200652 Ribosomal protein L14P [Interproscan]. 0.3 OrthoFinder
EOD23336 No alias Ribosomal protein L14P [Interproscan]. 0.02 OrthoFinder
EOD32651 No alias Ribosomal protein L14P [Interproscan]. 0.12 OrthoFinder
OT_16G00550.1 No alias Ribosomal protein L14P [Interproscan]. 0.26 OrthoFinder
PTI_28G00580.1 No alias Ribosomal protein L14P [Interproscan]. 0.34 OrthoFinder
Sro253_g099930.1 Contig3900.g29911 60S ribosomal protein L23 0.43 OrthoFinder
Sro884_mit_g215650.1 Rpl14 Rpl14 0.01 OrthoFinder
SymbC1.scaffold257.7 257.7 Ribosomal protein L14P [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold4594.5 4594.5 Ribosomal protein L14P [Interproscan]. 0.02 OrthoFinder
TP12G00360.1 No alias Ribosomal protein L14P [Interproscan]. 0.36 OrthoFinder
Vocar.0025s0131.1 32898418 Ribosomal protein L14P [Interproscan]. 0.27 OrthoFinder
XM_002502705.1 MICPUN_90970, 90970 Ribosomal protein L14P [Interproscan]. 0.25 OrthoFinder
XM_003060811.1 MicpuC2_37554, 37554 Ribosomal protein L14P [Interproscan]. 0.12 OrthoFinder
lcl|BLLF01000705.1_cds_GFH14251.1_8728 HaLaN_10271, GFH14251 Ribosomal protein L14P [Interproscan]. 0.12 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495558.1_1556 KAA8495558 60S ribosomal protein L23-B 0.22 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000218 Ribosomal_L14P 22 140
No external refs found!