1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000525.10

Cpa|evm.model.tig00000525.10 (tig00000525_g1953.t1)


Aliases : tig00000525_g1953.t1

Description : Cell division control protein 48 homolog C OS=Arabidopsis thaliana


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000525.10
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Cre09.g398550 30781371 Cell division control protein 48 homolog C... 0.02 OrthoFinder
OT_01G00660.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
OT_02G03140.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.03 OrthoFinder
OT_17G01910.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.03 OrthoFinder
PTI_04G04960.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.01 OrthoFinder
PTI_27G01230.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
Sro1272_g258180.1 Contig3783.g29035 Spermatogenesis-associated protein 5-like protein 1 0.01 OrthoFinder
Sro1493_g277320.1 Contig1998.g17101 Metalloprotease FTSH 0.03 OrthoFinder
Sro2528_g330360.1 Contig3353.g26271 Metalloprotease FTSH 0.01 OrthoFinder
Vocar.0006s0118.1 32893929 NVL2, nucleolin binding domain; ATPase, AAA-type, core;... 0.01 OrthoFinder
Vocar.0021s0058.1 32896069 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.01 OrthoFinder
XM_002500797.1 MICPUN_79795, 79795 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
lcl|BLLF01003257.1_cds_GFH26836.1_21313 HaLaN_25054, GFH26836 AAA domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 727 759
IPR031996 NVL2_nucleolin-bd 29 91
IPR003959 ATPase_AAA_core 583 704
IPR003959 ATPase_AAA_core 248 389
No external refs found!