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  5. lcl|LHPG02000008.1_cds_PRW56889.1_9759

lcl|LHPG02000008.1_cds_PRW56889.1_9759 (PRW56889)


Aliases : PRW56889

Description : Proteasome subunit beta type-3-A


Gene families : OG_01_0002457 (OrthoFinder) Phylogenetic Tree(s): OG0002457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56889.1_9759
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cre06.g267500 30779119 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder
EOD15128 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_20G00550.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
Sro1555_g282100.1 Contig2965.g23556 Proteasome subunit beta type-3 0.03 OrthoFinder
Sro2100_g314500.1 Contig2796.g22497 Proteasome subunit beta type-3 0.05 OrthoFinder
TP19G02230.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
XM_003062753.1 MicpuC2_22152, 22152 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004668 protein-arginine deiminase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
BP GO:0009445 putrescine metabolic process IEP Enrichment
BP GO:0009446 putrescine biosynthetic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 1 176
No external refs found!