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  5. lcl|LHPG02000008.1_cds_PRW56837.1_9820

lcl|LHPG02000008.1_cds_PRW56837.1_9820 (PRW56837)


Aliases : PRW56837

Description : Pentapeptide repeat family


Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56837.1_9820
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre16.g687300 30777804 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.04 OrthoFinder
Cz06g31130.t1 No alias Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 116 154
IPR001646 5peptide_repeat 79 108
No external refs found!