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  5. lcl|LHPG02000008.1_cds_PRW56699.1_9889

lcl|LHPG02000008.1_cds_PRW56699.1_9889 (PRW56699)


Aliases : PRW56699

Description : Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0007913 (OrthoFinder) Phylogenetic Tree(s): OG0007913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56699.1_9889
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
TP02G06750.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1183 1209
IPR002885 Pentatricopeptide_repeat 942 961
IPR002885 Pentatricopeptide_repeat 798 842
IPR002885 Pentatricopeptide_repeat 858 913
IPR002885 Pentatricopeptide_repeat 998 1057
IPR002885 Pentatricopeptide_repeat 1124 1156
No external refs found!