lcl|LHPG02000008.1_cds_PRW56666.1_9892 (PRW56666)


Aliases : PRW56666

Description : 50S ribosomal L18


Gene families : OG_01_0004009 (OrthoFinder) Phylogenetic Tree(s): OG0004009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56666.1_9892
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre01.g052100 30788991, PRPL18 Protein biosynthesis.organelle translation... 0.13 OrthoFinder
Cz09g08170.t1 No alias Ribosomal protein L18 [Interproscan]. 0.1 OrthoFinder
Dusal.0423s00013.1 33192022 Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
EOD04622 No alias Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
OT_07G04560.1 No alias Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
Sro51_chlor_g029630.1 Rpl18 Rpl18 0.02 OrthoFinder
SymbC1.scaffold436.6 436.6 Ribosomal protein L18 [Interproscan]. 0.02 OrthoFinder
TPCG02610.1 No alias Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder
Transcript_contig_59895 59895 Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder
Vocar.0001s0412.1 32884219 Ribosomal protein L18 [Interproscan]. 0.08 OrthoFinder
XM_002503130.1 MICPUN_59217, 59217 Ribosomal protein L18 (RPL18.1) 0.07 OrthoFinder
XM_003061146.1 MicpuC2_28274, 28274 Ribosomal protein L18 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 1 122
No external refs found!