Aliases : PRW56666
Description : 50S ribosomal L18
Gene families : OG_01_0004009 (OrthoFinder) Phylogenetic Tree(s): OG0004009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000008.1_cds_PRW56666.1_9892 | |
Cluster | HCCA: Cluster_44 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre01.g052100 | 30788991, PRPL18 | Protein biosynthesis.organelle translation... | 0.13 | OrthoFinder | |
Cz09g08170.t1 | No alias | Ribosomal protein L18 [Interproscan]. | 0.1 | OrthoFinder | |
Dusal.0423s00013.1 | 33192022 | Ribosomal protein L18 [Interproscan]. | 0.02 | OrthoFinder | |
EOD04622 | No alias | Ribosomal protein L18 [Interproscan]. | 0.02 | OrthoFinder | |
OT_07G04560.1 | No alias | Ribosomal protein L18 [Interproscan]. | 0.08 | OrthoFinder | |
Sro51_chlor_g029630.1 | Rpl18 | Rpl18 | 0.02 | OrthoFinder | |
SymbC1.scaffold436.6 | 436.6 | Ribosomal protein L18 [Interproscan]. | 0.02 | OrthoFinder | |
TPCG02610.1 | No alias | Ribosomal protein L18 [Interproscan]. | 0.03 | OrthoFinder | |
Transcript_contig_59895 | 59895 | Ribosomal protein L18 [Interproscan]. | 0.03 | OrthoFinder | |
Vocar.0001s0412.1 | 32884219 | Ribosomal protein L18 [Interproscan]. | 0.08 | OrthoFinder | |
XM_002503130.1 | MICPUN_59217, 59217 | Ribosomal protein L18 (RPL18.1) | 0.07 | OrthoFinder | |
XM_003061146.1 | MicpuC2_28274, 28274 | Ribosomal protein L18 [Interproscan]. | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Enrichment |
BP | GO:0006754 | ATP biosynthetic process | IEP | Enrichment |
BP | GO:0006812 | cation transport | IEP | Enrichment |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Enrichment |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Enrichment |
CC | GO:0009512 | cytochrome b6f complex | IEP | Enrichment |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Enrichment |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Enrichment |
BP | GO:0016485 | protein processing | IEP | Enrichment |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Enrichment |
BP | GO:0017004 | cytochrome complex assembly | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Enrichment |
MF | GO:0045158 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | IEP | Enrichment |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Enrichment |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
BP | GO:0051604 | protein maturation | IEP | Enrichment |
CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005484 | Ribosomal_L18 | 1 | 122 |
No external refs found! |