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  5. lcl|LHPG02000008.1_cds_PRW56662.1_9751

lcl|LHPG02000008.1_cds_PRW56662.1_9751 (PRW56662)


Aliases : PRW56662

Description : MYND finger


Gene families : OG_01_0000408 (OrthoFinder) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56662.1_9751
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000002.1_cds_PRW60632.1_4526 PRW60632 Ankyrin repeat and MYND domain-containing 0.04 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59495.1_6439 PRW59495 HIT MYND zinc finger 0.05 OrthoFinder
lcl|LHPG02000009.1_cds_PRW55939.1_10214 PRW55939 Ubiquitin carboxyl-terminal hydrolase 18-like 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56311.1_10187 PRW56311 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39170.1_2766 PRW39170 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
CC GO:0034998 oligosaccharyltransferase I complex IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 185 217
No external refs found!