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  5. lcl|LHPG02000008.1_cds_PRW56647.1_9488

lcl|LHPG02000008.1_cds_PRW56647.1_9488 (PRW56647)


Aliases : PRW56647

Description : DNA-directed RNA polymerase III subunit RPC5 isoform B


Gene families : OG_01_0003806 (OrthoFinder) Phylogenetic Tree(s): OG0003806_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56647.1_9488
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
XM_002507141.1 MICPUN_55174, 55174 DNA-directed RNA polymerase III subunit Rpc5 [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499707.1_8660 KAA8499707 DNA-directed RNA polymerase III subunit RPC5 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006886 RNA_pol_III_Rpc5 25 342
No external refs found!