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  5. lcl|LHPG02000008.1_cds_PRW56617.1_9463

lcl|LHPG02000008.1_cds_PRW56617.1_9463 (PRW56617)


Aliases : PRW56617

Description : 60S ribosomal L36-3-like


Gene families : OG_01_0003108 (OrthoFinder) Phylogenetic Tree(s): OG0003108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56617.1_9463
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.69 tig00021493_g21908.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder
Cre12.g484050 30792099, RPL36 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cz06g33040.t1 No alias Ribosomal protein L36e [Interproscan]. 0.09 OrthoFinder
Dusal.1916s00002.1 33187807 Ribosomal protein L36e [Interproscan]. 0.05 OrthoFinder
EOD30407 No alias Ribosomal protein L36e [Interproscan]. 0.1 OrthoFinder
OT_02G00860.1 No alias Ribosomal protein L36e [Interproscan]. 0.11 OrthoFinder
PTI_04G00610.1 No alias Ribosomal protein L36e [Interproscan]. 0.19 OrthoFinder
Sro327_g118470.1 Contig839.g9255 60S ribosomal protein L36 0.19 OrthoFinder
TP04G05720.1 No alias Ribosomal protein L36e [Interproscan]. 0.21 OrthoFinder
Vocar.0031s0112.1 32890137 Ribosomal protein L36e [Interproscan]. 0.12 OrthoFinder
XM_002507094.1 MICPUN_114038, 114038 60S ribosomal protein L36 (RPL36) 0.08 OrthoFinder
XM_003056471.1 MicpuC2_31782, 31782 60S ribosomal protein L36 (RPL36) 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499503.1_8456 KAA8499503 60S ribosomal protein L36-1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 3 94
No external refs found!