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  5. lcl|LHPG02000008.1_cds_PRW56532.1_9714

lcl|LHPG02000008.1_cds_PRW56532.1_9714 (PRW56532)


Aliases : PRW56532

Description : Mitochondrial


Gene families : OG_01_0004135 (OrthoFinder) Phylogenetic Tree(s): OG0004135_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56532.1_9714
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cre10.g425800 30790139, ORN1 Oligoribonuclease OS=Arabidopsis thaliana 0.04 OrthoFinder
Transcript_contig_58933 58933 Exonuclease, RNase T/DNA polymerase III [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 91 254
No external refs found!