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  5. lcl|LHPG02000008.1_cds_PRW56515.1_9742

lcl|LHPG02000008.1_cds_PRW56515.1_9742 (PRW56515)


Aliases : PRW56515

Description : 60S ribosomal L17-2


Gene families : OG_01_0003841 (OrthoFinder) Phylogenetic Tree(s): OG0003841_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56515.1_9742
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001215.8 tig00001215_g7572.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cre13.g568900 30784330, RPL17 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz08g22070.t1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.08 OrthoFinder
Dusal.0117s00014.1 33191086 Ribosomal protein L22/L17 [Interproscan]. 0.07 OrthoFinder
OT_06G03040.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.05 OrthoFinder
PTI_15G02710.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.1 OrthoFinder
Sro490_g153560.1 Contig328.g4376 60S ribosomal protein L17 0.08 OrthoFinder
TP03G04610.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.06 OrthoFinder
Vocar.0001s0273.1 32884978 Ribosomal protein L22/L17 [Interproscan]. 0.02 OrthoFinder
XM_002499746.1 MICPUN_93345, 93345 Ribosomal protein L22/L17 [Interproscan]. 0.06 OrthoFinder
XM_003062075.1 MicpuC2_49699, 49699 Ribosomal protein L22/L17 [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499482.1_8435 KAA8499482 60S ribosomal protein L17 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 16 151
No external refs found!