1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000008.1_cds_PRW56450.1_9465

lcl|LHPG02000008.1_cds_PRW56450.1_9465 (PRW56450)


Aliases : PRW56450

Description : Ribonuclease E G chloroplastic


Gene families : OG_01_0000144 (OrthoFinder) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000008.1_cds_PRW56450.1_9465
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre09.g407501 30780213 No description available 0.04 OrthoFinder
Cre09.g415600 30781240 No description available 0.03 OrthoFinder
Cz04g29100.t1 No alias Carbohydrate binding module family 20 [Interproscan]. 0.02 OrthoFinder
Dusal.0760s00002.1 33190089 Carbohydrate binding module family 20 [Interproscan]. 0.02 OrthoFinder
OT_06G01870.1 No alias Carbohydrate binding module family 20 [Interproscan]. 0.02 OrthoFinder
OT_10G00460.1 No alias Carbohydrate binding module family 20 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56883 56883 Carbohydrate binding module family 20; PPC89 centrosome... 0.01 OrthoFinder
Vocar.0001s1160.1 32885421 Carbohydrate binding module family 20 [Interproscan]. 0.02 OrthoFinder
XM_002502680.1 MICPUN_108362, 108362 Carbohydrate-binding module family 20 protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008818 cobalamin 5'-phosphate synthase activity IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002044 CBM_fam20 85 172
No external refs found!