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  5. lcl|LHPG02000007.1_cds_PRW57474.1_8932

lcl|LHPG02000007.1_cds_PRW57474.1_8932 (PRW57474)


Aliases : PRW57474

Description : Tetratricopeptide repeat 4-like protein


Gene families : OG_01_0005339 (OrthoFinder) Phylogenetic Tree(s): OG0005339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57474.1_8932
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021352.66 tig00021352_g20733.t1 No description available 0.03 OrthoFinder
Dusal.0145s00009.1 33195888 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!