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  5. lcl|LHPG02000007.1_cds_PRW57419.1_9053

lcl|LHPG02000007.1_cds_PRW57419.1_9053 (PRW57419)


Aliases : PRW57419

Description : DNA polymerase zeta


Gene families : OG_01_0005819 (OrthoFinder) Phylogenetic Tree(s): OG0005819_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57419.1_9053
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre09.g387400 30781405 DNA damage response.DNA repair polymerase activities.DNA... 0.02 OrthoFinder
Cz03g12100.t1 No alias C4-type zinc-finger of DNA polymerase delta;... 0.02 OrthoFinder
PTI_27G00490.1 No alias DNA-directed DNA polymerase, family B, multifunctional... 0.03 OrthoFinder
Vocar.0033s0087.1 32886346 DNA-directed DNA polymerase, family B, multifunctional... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0046677 response to antibiotic IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 86 250
IPR006133 DNA-dir_DNA_pol_B_exonuc 1166 1288
IPR006134 DNA-dir_DNA_pol_B_multi_dom 1358 1815
IPR025687 Znf-C4pol 1877 1952
No external refs found!