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  5. lcl|LHPG02000007.1_cds_PRW57345.1_8975

lcl|LHPG02000007.1_cds_PRW57345.1_8975 (PRW57345)


Aliases : PRW57345

Description : ATP-dependent Clp protease ATP-binding subunit


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57345.1_8975
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre10.g465550 30790230, CLPD1 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder
PTI_17G01580.1 No alias ClpA/ClpB, AAA lid domain; Clp, N-terminal; ATPase,... 0.02 OrthoFinder
Transcript_contig_54694 54694 ClpA/ClpB, AAA lid domain; Clp ATPase, C-terminal;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 237 371
IPR004176 Clp_R_dom 43 93
IPR004176 Clp_R_dom 116 150
IPR019489 Clp_ATPase_C 768 845
IPR041546 ClpA/ClpB_AAA_lid 388 494
IPR003959 ATPase_AAA_core 585 762
No external refs found!