lcl|LHPG02000007.1_cds_PRW57273.1_9027 (PRW57273)


Aliases : PRW57273

Description : Histone H4


Gene families : OG_01_0000049 (OrthoFinder) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57273.1_9027

Target Alias Description ECC score Gene Family Method Actions
Cre06.g265050 30779745, HFO13 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Cre06.g265450 30780160, HFO12 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Cre06.g274150 30779076 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Cre12.g504600 30793030, HFO15 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Cre12.g505450 30792334, HFO17 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Cre12.g506350 30793405, HFO18 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Cre12.g506450 30793367, HFO35 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Cre17.g709100 30782193 Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder
Dusal.0024s00010.1 33202207 CENP-T/Histone H4, histone fold [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 35 96
No external refs found!