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  5. lcl|LHPG02000007.1_cds_PRW57252.1_9225

lcl|LHPG02000007.1_cds_PRW57252.1_9225 (PRW57252)


Aliases : PRW57252

Description : DNA RNA-binding KIN17


Gene families : OG_01_0002838 (OrthoFinder) Phylogenetic Tree(s): OG0002838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57252.1_9225
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.59 tig00020830_g14442.t1 Nutrient uptake.copper uptake.regulation.KIN17 copper... 0.02 OrthoFinder
Cz08g30020.t1 No alias KN17, SH3-like C-terminal domain; DNA/RNA-binding... 0.01 OrthoFinder
Dusal.0013s00010.1 33200919 DNA/RNA-binding protein Kin17, conserved domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000456.1_cds_GFH11987.1_6464 HaLaN_07597, GFH11987 C2H2-type domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR041330 KN17_SH3 290 341
IPR019447 DNA/RNA-bd_Kin17_WH-like_dom 52 177
No external refs found!