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  5. lcl|LHPG02000007.1_cds_PRW57142.1_9317

lcl|LHPG02000007.1_cds_PRW57142.1_9317 (PRW57142)


Aliases : PRW57142

Description : Transcription factor GTE8-like


Gene families : OG_01_0000168 (OrthoFinder) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW57142.1_9317
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_54154 54154 NET domain; Bromodomain [Interproscan]. 0.02 OrthoFinder
Vocar.0020s0022.1 32886711 NET domain; Bromodomain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497134.1_863 KAA8497134 Transcription factor GTE10 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR001487 Bromodomain 229 294
No external refs found!