lcl|LHPG02000007.1_cds_PRW56986.1_9285 (PRW56986)

Aliases : PRW56986

Description : DNA helicase ATP-dependent

Gene families : OG_01_0001142 (OrthoFinder) Phylogenetic Tree(s): OG0001142_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000007.1_cds_PRW56986.1_9285
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g551550	30792623	No description available	0.02	OrthoFinder
Dusal.0009s00054.1	33190503	Zinc finger, CCHC-type; DNA helicase Pif1-like [Interproscan].	0.04	OrthoFinder
lcl\|BLLF01002188.1_cds_GFH23080.1_17557	HaLaN_20635, GFH23080	ATP-dependent DNA helicase	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATPase, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016887	ATPase	None	Extended
BP	GO:0032200	telomere organization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060249	anatomical structure homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	Enrichment
CC	GO:0000775	chromosome, centromeric region	IEP	Enrichment
MF	GO:0003856	3-dehydroquinate synthase activity	IEP	Enrichment
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Enrichment
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0007049	cell cycle	IEP	Enrichment
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Enrichment
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Enrichment
MF	GO:0038024	cargo receptor activity	IEP	Enrichment
MF	GO:0042393	histone binding	IEP	Enrichment
MF	GO:0045735	nutrient reservoir activity	IEP	Enrichment
MF	GO:0097020	COPII receptor activity	IEP	Enrichment
CC	GO:0098687	chromosomal region	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010285	DNA_helicase_pif1-like	288	396
IPR010285	DNA_helicase_pif1-like	61	268
IPR001878	Znf_CCHC	651	666
IPR001878	Znf_CCHC	769	785

External Links

No external refs found!

lcl|LHPG02000007.1_cds_PRW56986.1_9285 (PRW56986)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation