lcl|LHPG02000007.1_cds_PRW56960.1_9095 (PRW56960)


Aliases : PRW56960

Description : Ferredoxin


Gene families : OG_01_0001200 (OrthoFinder) Phylogenetic Tree(s): OG0001200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW56960.1_9095
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.99 tig00000076_g2397.t1 Coenzyme metabolism.iron-sulfur cluster assembly... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 189 248
IPR019574 NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd 114 149
IPR003149 Fe_hydrogenase_ssu 593 646
IPR004108 Fe_hydrogenase_lsu_C 269 583
No external refs found!