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  5. lcl|LHPG02000007.1_cds_PRW56943.1_9029

lcl|LHPG02000007.1_cds_PRW56943.1_9029 (PRW56943)


Aliases : PRW56943

Description : Peroxisome biogenesis 1 isoform X1


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW56943.1_9029
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cre09.g401182 30781475 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz09g30150.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
Vocar.0021s0058.1 32896069 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
lcl|BLLF01009482.1_cds_GFH33736.1_28213 HaLaN_33147, GFH33736 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005777 peroxisome IEA Interproscan
BP GO:0007031 peroxisome organization IEA Interproscan
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR015342 PEX-N_psi_beta-barrel 115 159
IPR003959 ATPase_AAA_core 197 383
IPR003959 ATPase_AAA_core 556 684
IPR010300 CDO_1 884 953
No external refs found!