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  5. lcl|LHPG02000007.1_cds_PRW56925.1_8799

lcl|LHPG02000007.1_cds_PRW56925.1_8799 (PRW56925)


Aliases : PRW56925

Description : ATP-dependent DNA helicase


Gene families : OG_01_0001341 (OrthoFinder) Phylogenetic Tree(s): OG0001341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW56925.1_8799
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre01.g021850 30789544 ATP-dependent DNA helicase homolog RECG, chloroplastic... 0.03 OrthoFinder
Cz03g15160.t1 No alias Helicase, C-terminal; Exonuclease, RNase T/DNA... 0.03 OrthoFinder
Vocar.0045s0043.1 32887754 DEAD/DEAH box helicase domain; Helicase, C-terminal;... 0.03 OrthoFinder
XM_003055304.1 MicpuC2_70648, 70648 DNA helicase/exonuclease (REX) 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP Enrichment
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 716 884
IPR013520 Exonuclease_RNaseT/DNA_pol3 108 275
IPR001650 Helicase_C 927 1046
No external refs found!