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  5. lcl|LHPG02000007.1_cds_PRW56910.1_9115

lcl|LHPG02000007.1_cds_PRW56910.1_9115 (PRW56910)


Aliases : PRW56910

Description : Light-harvesting of photosystem I


Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW56910.1_9115
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre01.g066917 30788321, LHCBM1 Photosynthesis.photophosphorylation.photosystem... 0.18 OrthoFinder
Cre03.g156900 30787808, LHCBM5 Photosynthesis.photophosphorylation.photosystem... 0.17 OrthoFinder
Cre04.g232104 30791553, LHCBM3 Photosynthesis.photophosphorylation.photosystem... 0.17 OrthoFinder
Cre06.g272650 30779881, LHCA8 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.18 OrthoFinder
Cre06.g278213 30779171, LHCA6 Chlorophyll a-b binding protein P4, chloroplastic... 0.13 OrthoFinder
Cre06.g283050 30779127, LHCA1 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.2 OrthoFinder
Cre06.g283950 30779716, LHCBM4 Photosynthesis.photophosphorylation.photosystem... 0.14 OrthoFinder
Cre06.g284250 30779962, LHCBM8 Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder
Cre06.g285250 30779463, LHCBM6 Photosynthesis.photophosphorylation.photosystem... 0.13 OrthoFinder
Cre07.g344950 30774737, LHCA9 Photosystem I chlorophyll a/b-binding protein 5,... 0.17 OrthoFinder
Cre10.g425900 30790196, LHCA5 Chlorophyll a-b binding protein 4, chloroplastic... 0.14 OrthoFinder
Cre10.g452050 30790835, LHCA4 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.11 OrthoFinder
Cre11.g467573 30776039, LHCA3 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.17 OrthoFinder
Cre12.g508750 30791684, LHCA2 Photosystem I chlorophyll a/b-binding protein 6,... 0.16 OrthoFinder
Cre12.g548400 30793460, LHCBM2 Photosynthesis.photophosphorylation.photosystem... 0.14 OrthoFinder
Cre12.g548950 30793494, LHCBM7 Photosynthesis.photophosphorylation.photosystem... 0.14 OrthoFinder
Cre16.g673650 30777655, LHCB5 Photosynthesis.photophosphorylation.photosystem... 0.14 OrthoFinder
Cre16.g687900 30778224, LHCA7 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.17 OrthoFinder
Cre17.g720250 30782643, LHCB4 Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder
Cz01g23030.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
Cz02g14140.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz03g26240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.16 OrthoFinder
Cz04g04130.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.09 OrthoFinder
Cz04g09210.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.15 OrthoFinder
Cz07g02100.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
Cz08g11160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.16 OrthoFinder
Cz09g32070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.16 OrthoFinder
Cz10g10160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.13 OrthoFinder
Cz12g16070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.15 OrthoFinder
Cz13g03240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.16 OrthoFinder
Cz15g09060.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.15 OrthoFinder
Cz15g17110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
Cz16g14150.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.16 OrthoFinder
Dusal.0008s00007.1 33198903 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0017s00032.1 33200485 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Dusal.0027s00004.1 33191535 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Dusal.0042s00004.1 33189888 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Dusal.0048s00036.1 33189483 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0049s00019.1 33200350 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Dusal.0081s00007.1 33198263 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Dusal.3971s00001.1 33198839 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
OT_01G04980.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
OT_02G03050.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_02G04550.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_03G04590.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_03G04600.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_03G04960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.1 OrthoFinder
OT_05G03910.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_07G02590.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
OT_09G04490.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.11 OrthoFinder
OT_11G01010.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
OT_14G01300.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.09 OrthoFinder
OT_16G00460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.12 OrthoFinder
OT_16G02540.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.12 OrthoFinder
OT_18G01270.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
PTI_17G00760.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_20G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Transcript_contig_58645 58645 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Transcript_contig_58829 58829 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59040 59040 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Transcript_contig_79146 79146 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_79793 79793 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_90701 90701 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
UNPLg00080.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
Vocar.0001s1775.1 32885648 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0071.1 32890569 Chlorophyll A-B binding protein [Interproscan]. 0.1 OrthoFinder
Vocar.0002s0281.1 32890560 Chlorophyll A-B binding protein [Interproscan]. 0.12 OrthoFinder
Vocar.0002s0333.1 32890723 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Vocar.0005s0361.1 32883819 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0007s0216.1 32888272 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0009s0370.1 32893259 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Vocar.0011s0017.1 32895358 Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Vocar.0012s0172.1 32895002 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0012s0221.1 32894985 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0014s0016.1 32888452 Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Vocar.0015s0072.1 32899153 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0243.1 32897935 Chlorophyll A-B binding protein [Interproscan]. 0.11 OrthoFinder
Vocar.0018s0037.1 32898532 Chlorophyll A-B binding protein [Interproscan]. 0.08 OrthoFinder
Vocar.0021s0124.1 32896004 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Vocar.0023s0180.1 32883354 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0028s0157.1 32895586 Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Vocar.0030s0156.1 32894566 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
XM_002499584.1 MICPUN_113644, 113644 Prasinophyte specific chlorophyll a/b-binding protein,... 0.1 OrthoFinder
XM_002499585.1 MICPUN_56050, 56050 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_002500047.1 MICPUN_93465, 93465 Prasinophyte specific light harvesting complex protein,... 0.09 OrthoFinder
XM_002500767.1 MICPUN_90184, 90184 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_002501106.1 MICPUN_90394, 90394 Chlorophyll a/b-binding protein, psi-associated,... 0.1 OrthoFinder
XM_002502183.1 MICPUN_104821, 104821 Chlorophyll a/b-binding protein, psi-associated,... 0.05 OrthoFinder
XM_002502697.1 MICPUN_104840, 104840 Prasinophyte specific chlorophyll a/b-binding protein (LHCP2.3) 0.03 OrthoFinder
XM_002503617.1 MICPUN_104895, 104895 Prasinophyte specific chlorophyll a/b-binding protein,... 0.02 OrthoFinder
XM_002505041.1 MICPUN_104964, 104964 Chlorophyll a/b-binding protein, psi-associated,... 0.09 OrthoFinder
XM_002505496.1 MICPUN_95759, 95759 Chlorophyll a/b-binding protein CP26, chloroplast... 0.04 OrthoFinder
XM_002506245.1 MICPUN_92498, 92498 Chlorophyll a/b-binding protein CP29, chloroplast... 0.03 OrthoFinder
XM_002507043.1 MICPUN_104693, 104693 Chlorophyll a/b-binding protein, psi-associated,... 0.05 OrthoFinder
XM_002507210.1 MICPUN_113648, 113648 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_002507237.1 MICPUN_55391, 55391 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA5) 0.05 OrthoFinder
XM_002507443.1 MICPUN_54950, 54950 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA2) 0.06 OrthoFinder
XM_003054893.1 MicpuC2_45156, 45156 Prasinophyte specific chlorophyll a/b-binding protein,... 0.04 OrthoFinder
XM_003055372.1 MicpuC2_50023, 50023 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA5) 0.03 OrthoFinder
XM_003055426.1 MicpuC2_46212, 46212 Prasinophyte specific chlorophyll a/b-binding protein (LHCP2.7) 0.05 OrthoFinder
XM_003057773.1 MicpuC2_45464, 45464 Prasinophyte specific chlorophyll a/b-binding protein,... 0.09 OrthoFinder
XM_003057791.1 MicpuC2_57460, 57460 Prasinophyte specific chlorophyll a/b-binding protein,... 0.05 OrthoFinder
XM_003058148.1 MicpuC2_70880, 70880 Prasinophyte specific chlorophyll a/b-binding protein,... 0.08 OrthoFinder
XM_003059347.1 MicpuC2_49615, 49615 Prasinophyte specific chlorophyll a/b-binding protein,... 0.06 OrthoFinder
XM_003059477.1 MicpuC2_49623, 49623 Chlorophyll a/b-binding protein, psi-associated,... 0.05 OrthoFinder
XM_003060148.1 MicpuC2_70906, 70906 Chlorophyll a/b-binding protein (LHCQ) 0.02 OrthoFinder
XM_003061061.1 MicpuC2_70879, 70879 Prasinophyte specific chlorophyll a/b-binding protein,... 0.1 OrthoFinder
XM_003063485.1 MicpuC2_70908, 70908 Chlorophyll a/b-binding protein CP29, chloroplast... 0.03 OrthoFinder
XM_003063603.1 MicpuC2_36592, 36592 Chlorophyll a/b-binding protein CP26, chloroplast... 0.02 OrthoFinder
XM_003064530.1 MicpuC2_46049, 46049 Chlorophyll a/b-binding protein, psi-associated,... 0.03 OrthoFinder
lcl|BLLF01000146.1_cds_GFH08210.1_2687 HaLaN_03140, GFH08210 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01000518.1_cds_GFH12589.1_7066 HaLaN_08302, GFH12589 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01000682.1_cds_GFH14061.1_8538 HaLaN_10037, GFH14061 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|BLLF01000742.1_cds_GFH14568.1_9045 HaLaN_10649, GFH14568 Chlorophyll a-b binding protein, chloroplastic 0.06 OrthoFinder
lcl|BLLF01000768.1_cds_GFH14802.1_9279 HaLaN_10920, GFH14802 Chlorophyll a-b binding protein, chloroplastic 0.06 OrthoFinder
lcl|BLLF01000956.1_cds_GFH16169.1_10646 HaLaN_12540, GFH16169 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01001042.1_cds_GFH16728.1_11205 HaLaN_13210, GFH16728 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01001360.1_cds_GFH18804.1_13281 HaLaN_15665, GFH18804 Chlorophyll a-b binding protein, chloroplastic 0.06 OrthoFinder
lcl|BLLF01001656.1_cds_GFH20549.1_15026 HaLaN_17690, GFH20549 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|BLLF01002496.1_cds_GFH24298.1_18775 HaLaN_22066, GFH24298 Chlorophyll a-b binding protein, chloroplastic 0.04 OrthoFinder
lcl|BLLF01002822.1_cds_GFH25467.1_19944 HaLaN_23439, GFH25467 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01003335.1_cds_GFH27060.1_21537 HaLaN_25318, GFH27060 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 19 193
No external refs found!