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  5. lcl|LHPG02000006.1_cds_PRW58039.1_8659

lcl|LHPG02000006.1_cds_PRW58039.1_8659 (PRW58039)


Aliases : PRW58039

Description : 50S ribosomal L35


Gene families : OG_01_0005265 (OrthoFinder) Phylogenetic Tree(s): OG0005265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000006.1_cds_PRW58039.1_8659
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre04.g217932 30790977, PRPL35 Protein biosynthesis.organelle translation... 0.13 OrthoFinder
Cz18g04200.t1 No alias Ribosomal protein L35 [Interproscan]. 0.07 OrthoFinder
Dusal.0118s00009.1 33199927 Ribosomal protein L35 [Interproscan]. 0.02 OrthoFinder
Sro51_chlor_g030760.1 Rpl35 Rpl35 0.04 OrthoFinder
TPCG00570.1 No alias Ribosomal protein L35 [Interproscan]. 0.06 OrthoFinder
Vocar.0013s0208.1 32896281 Ribosomal protein L35 [Interproscan]. 0.06 OrthoFinder
XM_002500866.1 MICPUN_56879, 56879 Ribosomal protein L35 [Interproscan]. 0.1 OrthoFinder
lcl|BLLF01000115.1_cds_GFH07783.1_2260 HaLaN_02636, GFH07783 50S ribosomal protein L35 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 71 130
No external refs found!