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  5. lcl|LHPG02000006.1_cds_PRW57926.1_8416

lcl|LHPG02000006.1_cds_PRW57926.1_8416 (PRW57926)


Aliases : PRW57926

Description : 60S ribosomal L35a-3


Gene families : OG_01_0003454 (OrthoFinder) Phylogenetic Tree(s): OG0003454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000006.1_cds_PRW57926.1_8416
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020723.23 tig00020723_g13442.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 OrthoFinder
Cre10.g459250 30790514, RPL35a Protein biosynthesis.cytosolic ribosome.large subunit... 0.32 OrthoFinder
Cz08g32140.t1 No alias Ribosomal protein L35A [Interproscan]. 0.22 OrthoFinder
Dusal.0293s00005.1 33190176 Ribosomal protein L35A [Interproscan]. 0.07 OrthoFinder
EOD28237 No alias Ribosomal protein L35A [Interproscan]. 0.21 OrthoFinder
EOD40099 No alias 60S ribosomal protein L35A [Ensembl]. 0.21 OrthoFinder
OT_08G03250.1 No alias Ribosomal protein L35A [Interproscan]. 0.11 OrthoFinder
PTI_26G00860.1 No alias Ribosomal protein L35A [Interproscan]. 0.2 OrthoFinder
Sro60_g034780.1 Contig797.g8955 60S ribosomal protein L35a 0.25 OrthoFinder
SymbC1.scaffold1015.3 1015.3 Ribosomal protein L35A [Interproscan]. 0.03 OrthoFinder
TP10G03680.1 No alias Ribosomal protein L35A [Interproscan]. 0.2 OrthoFinder
Vocar.0020s0177.1 32886748 Ribosomal protein L35A [Interproscan]. 0.19 OrthoFinder
XM_002508291.1 MICPUN_108826, 108826 Ribosomal protein L35A [Interproscan]. 0.27 OrthoFinder
XM_003058988.1 MicpuC2_58446, 58446 Ribosomal protein L35A [Interproscan]. 0.09 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495080.1_3610 KAA8495080 60S ribosomal protein L35a 0.27 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008430 selenium binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR024989 MFS_assoc_dom 171 482
IPR001780 Ribosomal_L35A 8 102
No external refs found!