lcl|LHPG02000006.1_cds_PRW57893.1_8754 (PRW57893)

Aliases : PRW57893

Description : Type I polyketide synthase

Gene families : OG_01_0002329 (OrthoFinder) Phylogenetic Tree(s): OG0002329_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000006.1_cds_PRW57893.1_8754
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method	Actions
lcl\|BLLF01001312.1_cds_GFH18520.1_12997	HaLaN_15341, GFH18520	Beta-ketoacyl synthase, N-terminal [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017056	structural constituent of nuclear pore	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Enrichment
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Enrichment
MF	GO:0003951	NAD+ kinase activity	IEP	Enrichment
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006401	RNA catabolic process	IEP	Enrichment
BP	GO:0006402	mRNA catabolic process	IEP	Enrichment
BP	GO:0006739	NADP metabolic process	IEP	Enrichment
BP	GO:0006741	NADP biosynthetic process	IEP	Enrichment
BP	GO:0010468	regulation of gene expression	IEP	Enrichment
BP	GO:0010629	negative regulation of gene expression	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Enrichment
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Enrichment
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Enrichment
CC	GO:0090730	Las1 complex	IEP	Enrichment
CC	GO:1902555	endoribonuclease complex	IEP	Enrichment
CC	GO:1902911	protein kinase complex	IEP	Enrichment
CC	GO:1905354	exoribonuclease complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007230	Peptidase_S59	458	657
IPR009081	PP-bd_ACP	299	362
IPR009081	PP-bd_ACP	174	236

External Links

No external refs found!