Aliases : PRW57884
Description : AP-2 complex subunit mu
Gene families : OG_01_0000738 (OrthoFinder) Phylogenetic Tree(s): OG0000738_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000006.1_cds_PRW57884.1_8711 | |
Cluster | HCCA: Cluster_95 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021168.13 | tig00021168_g19079.t1 | AP-2 complex subunit mu OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00021181.5 | tig00021181_g19309.t1 | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.01 | OrthoFinder | |
Cz02g16120.t1 | No alias | Mu homology domain [Interproscan]. | 0.02 | OrthoFinder | |
Cz13g06130.t1 | No alias | AP complex, mu/sigma subunit [Interproscan]. | 0.02 | OrthoFinder | |
Dusal.0629s00005.1 | 33201002 | Mu homology domain [Interproscan]. | 0.04 | OrthoFinder | |
EOD10147 | No alias | Apm2, medium subunit of the adaptin 2 complex [Ensembl]. | 0.02 | OrthoFinder | |
EOD24729 | No alias | Apm2, medium subunit of the adaptin 2 complex [Ensembl]. | 0.02 | OrthoFinder | |
EOD33288 | No alias | Adaptor protein 1 medium subunit [Ensembl]. | 0.05 | OrthoFinder | |
EOD33289 | No alias | Adaptor protein 1 medium subunit [Ensembl]. | 0.05 | OrthoFinder | |
PTI_06G03260.1 | No alias | Mu homology domain; AP complex, mu/sigma subunit [Interproscan]. | 0.03 | OrthoFinder | |
Sro300_g111750.1 | Contig270.g3463 | AP-2 complex subunit mu | 0.02 | OrthoFinder | |
Sro643_g180290.1 | Contig2037.g17507 | AP-1 complex subunit mu | 0.02 | OrthoFinder | |
Transcript_contig_54314 | 54314 | AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. | 0.03 | OrthoFinder | |
Vocar.0052s0018.1 | 32897683 | AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. | 0.02 | OrthoFinder | |
XM_002500455.1 | MICPUN_52211, 52211 | AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. | 0.03 | OrthoFinder | |
XM_003063463.1 | MicpuC2_29751, 29751 | Mu homology domain; AP complex, mu/sigma subunit [Interproscan]. | 0.03 | OrthoFinder | |
lcl|BLLF01000081.1_cds_GFH07212.1_1689 | HaLaN_01982, GFH07212 | MHD domain-containing protein | 0.03 | OrthoFinder | |
lcl|BLLF01000389.1_cds_GFH11275.1_5752 | HaLaN_06750, GFH11275 | Mu1-adaptin | 0.02 | OrthoFinder | |
lcl|BLLF01002790.1_cds_GFH25350.1_19827 | HaLaN_23295, GFH25350 | MHD domain-containing protein | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Enrichment |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
MF | GO:0003682 | chromatin binding | IEP | Enrichment |
MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
MF | GO:0003924 | GTPase activity | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
MF | GO:0005047 | signal recognition particle binding | IEP | Enrichment |
MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005506 | iron ion binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Enrichment |
BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006414 | translational elongation | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006457 | protein folding | IEP | Enrichment |
BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
BP | GO:0019346 | transsulfuration | IEP | Enrichment |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
MF | GO:0019842 | vitamin binding | IEP | Enrichment |
MF | GO:0019899 | enzyme binding | IEP | Enrichment |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Enrichment |
MF | GO:0031491 | nucleosome binding | IEP | Enrichment |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0036211 | protein modification process | IEP | Enrichment |
MF | GO:0042277 | peptide binding | IEP | Enrichment |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
No external refs found! |