lcl|LHPG02000006.1_cds_PRW57823.1_8738 (PRW57823)


Aliases : PRW57823

Description : ATP-dependent helicase


Gene families : OG_01_0000443 (OrthoFinder) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000006.1_cds_PRW57823.1_8738
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cz01g08220.t1 No alias DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like,... 0.02 OrthoFinder
Cz04g08090.t1 No alias DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like,... 0.03 OrthoFinder
EOD22729 No alias DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,... 0.01 OrthoFinder
PTI_03G00240.1 No alias DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like,... 0.02 OrthoFinder
PTI_13G02850.1 No alias DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like,... 0.02 OrthoFinder
lcl|BLLF01000774.1_cds_GFH14855.1_9332 HaLaN_10981, GFH14855 DNA2/NAM7 helicase, AAA domain; DNA2/NAM7 helicase-like,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 1291 1491
IPR041677 DNA2/NAM7_AAA_11 885 1282
No external refs found!