lcl|LHPG02000006.1_cds_PRW57722.1_8596 (PRW57722)

Aliases : PRW57722

Description : 30S ribosomal S18

Gene families : OG_01_0004123 (OrthoFinder) Phylogenetic Tree(s): OG0004123_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|LHPG02000006.1_cds_PRW57722.1_8596
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cre09.g388282 30780462, MRPS18 No description available 0.03 OrthoFinder
TPCG00780.1 No alias Ribosomal protein S18 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57475 57475 Hypothetical protein 0.02 OrthoFinder
XM_003062800.1 MicpuC2_21905, 21905 Ribosomal protein S18 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 226 274
No external refs found!