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  5. lcl|LHPG02000006.1_cds_PRW57589.1_8433

lcl|LHPG02000006.1_cds_PRW57589.1_8433 (PRW57589)


Aliases : PRW57589

Description : Zinc finger, MYND-type [Interproscan].


Gene families : OG_01_0000408 (OrthoFinder) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000006.1_cds_PRW57589.1_8433
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000002.1_cds_PRW60823.1_4748 PRW60823 3-oxoacyl-[acyl-carrier] reductase 4-like 0.05 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60852.1_4380 PRW60852 Ocs element-binding factor 1-like 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 474 506
No external refs found!