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  5. lcl|LHPG02000005.1_cds_PRW58719.1_7748

lcl|LHPG02000005.1_cds_PRW58719.1_7748 (PRW58719)


Aliases : PRW58719

Description : Copper responsive regulator 1 isoform B


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58719.1_7748
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre06.g300600 30780087 RNA biosynthesis.transcriptional activation.SBP... 0.07 OrthoFinder
Cre09.g390023 30781493, CRR1 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder
Cz09g29010.t1 No alias SBP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57935 57935 SBP domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_78466 78466 SBP domain [Interproscan]. 0.02 OrthoFinder
Vocar.0003s0435.1 32889022 SBP domain [Interproscan]. 0.01 OrthoFinder
Vocar.0012s0159.1 32894892 SBP domain; BTB/POZ domain [Interproscan]. 0.05 OrthoFinder
Vocar.0028s0178.1 32895527 Hypothetical protein 0.03 OrthoFinder
XM_003059549.1 MicpuC2_47586, 47586 SBP domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 49 122
No external refs found!