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  5. lcl|LHPG02000005.1_cds_PRW58626.1_7809

lcl|LHPG02000005.1_cds_PRW58626.1_7809 (PRW58626)


Aliases : PRW58626

Description : Epimerase family SDR39U1 chloroplastic isoform X1 isoform B


Gene families : OG_01_0001660 (OrthoFinder) Phylogenetic Tree(s): OG0001660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58626.1_7809
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre05.g233305 30783049 Cell cycle.organelle machineries.organelle... 0.09 OrthoFinder
Cz14g01210.t1 No alias Domain of unknown function DUF1731 [Interproscan]. 0.04 OrthoFinder
Cz14g01220.t1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.04 OrthoFinder
OT_05G02450.1 No alias Domain of unknown function DUF1731; NAD-dependent... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR013549 DUF1731 332 377
IPR001509 Epimerase_deHydtase 84 298
No external refs found!