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  5. lcl|LHPG02000005.1_cds_PRW58570.1_7905

lcl|LHPG02000005.1_cds_PRW58570.1_7905 (PRW58570)


Aliases : PRW58570

Description : Beta-Ig-H3 fasciclin


Gene families : OG_01_0000134 (OrthoFinder) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58570.1_7905
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_79987 79987 FAS1 domain; LysM domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60725.1_4370 PRW60725 Beta-Ig-H3 fasciclin 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000782 FAS1_domain 110 243
No external refs found!