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  5. lcl|LHPG02000005.1_cds_PRW58569.1_8100

lcl|LHPG02000005.1_cds_PRW58569.1_8100 (PRW58569)


Aliases : PRW58569

Description : 60S ribosomal L24-like


Gene families : OG_01_0002766 (OrthoFinder) Phylogenetic Tree(s): OG0002766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58569.1_8100
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001093.9 tig00001093_g6884.t1 No description available 0.12 OrthoFinder
Cre09.g391097 30781301, RPL24 Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 OrthoFinder
Cz02g32210.t1 No alias Ribosomal protein L24e-related [Interproscan]. 0.17 OrthoFinder
Dusal.0883s00005.1 33201955 Ribosomal protein L24e-related [Interproscan]. 0.1 OrthoFinder
EOD04136 No alias Leucine-rich repeat; Ribosomal protein L24e-related... 0.02 OrthoFinder
OT_15G03060.1 No alias Ribosomal protein L24e-related [Interproscan]. 0.08 OrthoFinder
PTI_04G04830.1 No alias Ribosomal protein L24e-related [Interproscan]. 0.24 OrthoFinder
Sro178_g078160.1 Contig275.g3541 60S ribosomal protein L24 0.24 OrthoFinder
SymbC1.scaffold1321.5 1321.5 Ribosomal protein L24e-related [Interproscan]. 0.06 OrthoFinder
TP03G04280.1 No alias Ribosomal protein L24e-related [Interproscan]. 0.22 OrthoFinder
Transcript_contig_59923 59923 Ribosomal protein L24e-related [Interproscan]. 0.05 OrthoFinder
Vocar.0056s0007.1 32896673 Ribosomal protein L24e-related [Interproscan]. 0.16 OrthoFinder
XM_003060067.1 MicpuC2_27633, 27633 Ribosomal protein L24e-related [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01002834.1_cds_GFH25503.1_19980 HaLaN_23482, GFH25503 TRASH domain-containing protein 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497370.1_1099 KAA8497370 60S ribosomal protein L24 0.15 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 4 67
No external refs found!