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  5. lcl|LHPG02000005.1_cds_PRW58483.1_7904

lcl|LHPG02000005.1_cds_PRW58483.1_7904 (PRW58483)


Aliases : PRW58483

Description : Beta-Ig-H3 fasciclin


Gene families : OG_01_0000134 (OrthoFinder) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58483.1_7904
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_67904 67904 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_79987 79987 FAS1 domain; LysM domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58312.1_7906 PRW58312 Beta-Ig-H3 fasciclin 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0002376 immune system process IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0009620 response to fungus IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0050832 defense response to fungus IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
InterPro domains Description Start Stop
IPR018392 LysM_dom 23 67
IPR018392 LysM_dom 243 286
IPR000782 FAS1_domain 88 217
No external refs found!