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  5. Cpa|evm.model.tig00000498.35

Cpa|evm.model.tig00000498.35 (tig00000498_g1611.t1)


Aliases : tig00000498_g1611.t1

No description available


Gene families : OG_01_0001328 (OrthoFinder) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000498.35
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Sro112_g055500.1 Contig1575.g14275 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro1705_g292400.1 Contig4149.g31668 Hypothetical protein 0.01 OrthoFinder
Sro2335_g323820.1 Contig3717.g28592 Autoinducer 1 sensor kinase/phosphatase LuxN 0.01 OrthoFinder
Sro394_g133870.1 Contig4153.g31717 Sensor kinase/phosphatase LuxQ 0.01 OrthoFinder
Sro96_g049610.1 Contig3763.g28887 Respiration control sensor protein ArcB 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013655 PAS_fold_3 197 266
IPR001789 Sig_transdc_resp-reg_receiver 591 671
IPR003594 HATPase_C 403 542
IPR003661 HisK_dim/P 297 360
No external refs found!