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  5. lcl|LHPG02000005.1_cds_PRW58407.1_8049

lcl|LHPG02000005.1_cds_PRW58407.1_8049 (PRW58407)


Aliases : PRW58407

Description : Nuclear pore complex NUP50A-like isoform X1


Gene families : OG_01_0004979 (OrthoFinder) Phylogenetic Tree(s): OG0004979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58407.1_8049
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Dusal.0012s00025.1 33201999 Ran binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56806 56806 Hypothetical protein 0.02 OrthoFinder
Vocar.0012s0053.1 32894929 Ran binding domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 299 392
IPR015007 NUP2/50/61 14 78
No external refs found!