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  5. lcl|LHPG02000005.1_cds_PRW58312.1_7906

lcl|LHPG02000005.1_cds_PRW58312.1_7906 (PRW58312)


Aliases : PRW58312

Description : Beta-Ig-H3 fasciclin


Gene families : OG_01_0000134 (OrthoFinder) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58312.1_7906
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
EOD34727 No alias FAS1 domain [Interproscan]. 0.03 OrthoFinder
Sro432_g141680.1 Contig1545.g14023 Beta-induced protein ig-h3 0.02 OrthoFinder
Transcript_contig_67904 67904 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_79987 79987 FAS1 domain; LysM domain [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58483.1_7904 PRW58483 Beta-Ig-H3 fasciclin 0.04 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56041.1_10329 PRW56041 Nex18 symbiotically induced 0.04 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20912.1_5058 PRW20912 Beta-Ig-H3 fasciclin 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR018392 LysM_dom 27 72
IPR018392 LysM_dom 243 284
IPR000782 FAS1_domain 98 225
No external refs found!