lcl|LHPG02000005.1_cds_PRW58283.1_8023 (PRW58283)

Aliases : PRW58283

Description : Retrotransposon gag domain; Zinc finger, CCHC-type [Interproscan].

Gene families : OG_01_0002134 (OrthoFinder) Phylogenetic Tree(s): OG0002134_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000005.1_cds_PRW58283.1_8023
Cluster	HCCA: Cluster_63

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	218	234
IPR005162	Retrotrans_gag_dom	19	110

External Links

No external refs found!